RFdiffusion vs RFdiffusion2

RFdiffusion: Diffusion model for de novo protein backbone design and binder design. RFdiffusion2: Atom-level enzyme active-site scaffolding with diffusion, no sequence-position constraints.

Facts below come from each project's own website, repository and paper. We don't publish benchmark claims here; see the papers for evaluations. Shared tags: diffusion.

FieldRFdiffusionRFdiffusion2
TaskBackbone generation, binder design, motif scaffoldingEnzyme active-site scaffolding
ModalitiesProtein (binders, symmetric assemblies)Enzyme from functional-group geometry
MSA required——
Open weightsYesYes
GPU need——
LicenseBSD-3-ClauseBSD-3-Clause
PricingOpen sourceOpen source
Released2022-12-102025-04-10
PaperLinkLink
GitHubGitHubGitHub
GitHub stars3,088450
InterfacePackage, Docker, Colab—

License and commercial use

FieldRFdiffusionRFdiffusion2
Code licenseBSD-3-ClauseBSD-3-Clause
Weights license——
Commercial usePermissive (commercial OK)Permissive (commercial OK)
AnswerYes. The recorded license is permissive, so closed-source commercial use is allowed if you keep the notices. DetailsYes. The recorded license is permissive, so closed-source commercial use is allowed if you keep the notices. Details

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