← Single-cell & foundation models
scvi-tools
Probabilistic deep generative models for single-cell omics (scVI, totalVI, scANVI...).
| Category | Single-cell & foundation models |
|---|---|
| GitHub | scverse/scvi-tools |
| First public | 2020-09-17 (source) |
| Paper | https://www.nature.com/articles/s41587-021-01206-w |
| License | BSD-3-Clause |
| Pricing | Open source |
| Tags | #vae#integration#python |
| Last checked | 2026-10-16 |
Specs
| Pretraining corpus | — |
|---|---|
| Architecture | Probabilistic generative models (VAE) |
| Tasks | Dimensionality reduction, integration, differential expression, annotation |
| Species | — |
| GitHub stars | 1,713 |
| Interface | Package |
Specs come from each project's README, paper or official page · scvi-tools README · scvi-tools site. “—” means we couldn't verify it.
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