Novae
Graph-based foundation model for spatial transcriptomics: zero-shot spatial domains and cross-slide/cross-technology integration.
| Category | Spatial omics |
|---|---|
| GitHub | prism-oncology/novae |
| First public | 2024-09-09 (source) |
| Paper | https://doi.org/10.1038/s41592-025-02899-6 · Nature Methods (2025) |
| License | BSD-3-Clause |
| Pricing | Open source |
| Tags | #foundation-model#graph#spatial-domains |
| Last checked | 2026-10-16 |
Specs
| Platforms supported | — |
|---|---|
| Resolution | Single cell |
| Tasks | Spatial domains, batch integration |
| GitHub stars | 162 |
| Interface | — |
Specs come from each project's README, paper or official page · Novae README · Novae paper. “—” means we couldn't verify it.
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