Loki (OmiCLIP)
Visual–omics foundation model aligning H&E histology with spatial transcriptomics for tissue alignment, cell-type decomposition and expression prediction.
| Category | Spatial omics |
|---|---|
| GitHub | GuangyuWangLab2021/Loki |
| First public | 2025-04-16 (source) |
| Paper | https://doi.org/10.1038/s41592-025-02707-1 · Nature Methods (2025) |
| License | BSD-3-Clause (non-commercial, academic use) |
| Pricing | Open source (non-commercial) |
| Tags | #foundation-model#histology#multimodal |
| Last checked | 2026-10-16 |
Specs
| Platforms supported | H&E + spatial transcriptomics |
|---|---|
| Resolution | — |
| Tasks | Histology–ST alignment, decomposition, expression prediction |
| GitHub stars | 151 |
| Interface | — |
Specs come from each project's README, paper or official page · Loki (OmiCLIP) README · Loki (OmiCLIP) paper. “—” means we couldn't verify it.
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