ViennaRNA
Standard RNA secondary structure prediction and design package (RNAfold, RNAinverse).
| Category | RNA structure & design |
|---|---|
| GitHub | ViennaRNA/ViennaRNA |
| First public | 2011-11-24 (source) |
| Paper | https://doi.org/10.1186/1748-7188-6-26 |
| License | Custom permissive (ViennaRNA) |
| Pricing | Open source |
| Tags | #secondary-structure#design#thermodynamics |
| Last checked | 2026-10-16 |
Specs
| Task | MFE, partition function, inverse folding |
|---|---|
| Structure level (2D / 3D) | 2D |
| Input | RNA sequence |
| GitHub stars | 438 |
| Interface | Package |
Specs come from each project's README, paper or official page · ViennaRNA README · ViennaRNA paper · ViennaRNA site. “—” means we couldn't verify it.
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