SPOT-RNA
Deep learning RNA secondary structure prediction including non-canonical pairs and pseudoknots.
| Category | RNA structure & design |
|---|---|
| GitHub | jaswindersingh2/SPOT-RNA |
| First public | 2019-11-27 (source) |
| Paper | https://doi.org/10.1038/s41467-019-13395-9 |
| License | MPL-2.0 |
| Pricing | Open source |
| Tags | #secondary-structure#pseudoknots#deep-learning |
| Last checked | 2026-10-16 |
Specs
| Task | Base pairs incl. non-canonical and pseudoknots |
|---|---|
| Structure level (2D / 3D) | 2D |
| Input | RNA sequence |
| GitHub stars | 106 |
| Interface | Package |
Specs come from each project's README, paper or official page · SPOT-RNA README · SPOT-RNA paper. “—” means we couldn't verify it.
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