← Sequencing & variant calling
ClairS-TO
Deep-learning tumor-only somatic small-variant caller for long reads, from the Clair3 team.
| Category | Sequencing & variant calling |
|---|---|
| GitHub | HKU-BAL/ClairS-TO |
| First public | 2025-03-10 (source) |
| Paper | https://doi.org/10.1038/s41467-025-64547-z · Nature Communications (2025) |
| License | BSD-3-Clause |
| Pricing | Open source |
| Tags | #variant-calling#somatic#long-read |
| Last checked | 2026-10-16 |
Specs
| Sequencing platform | Oxford Nanopore, PacBio |
|---|---|
| Task | Tumor-only somatic calling |
| Variant types | SNVs, indels |
| GitHub stars | 98 |
| Interface | — |
Specs come from each project's README, paper or official page · ClairS-TO README · ClairS-TO paper. “—” means we couldn't verify it.
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