← Single-cell & foundation models
scDeepSort
Pretrained weighted graph neural network for cell-type annotation of scRNA-seq data.
| Category | Single-cell & foundation models |
|---|---|
| GitHub | ZJUFanLab/scDeepSort |
| First public | 2020-04-18 (source) |
| Paper | https://doi.org/10.1093/nar/gkab775 · Nucleic Acids Research (2021) |
| License | GPL-3.0 |
| Pricing | Open source |
| Tags | #single-cell#transcriptomics#deep-learning |
| Last checked | 2026-10-16 |
Specs
| Pretraining corpus | Human and mouse reference atlases |
|---|---|
| Architecture | Weighted graph neural network |
| Tasks | Cell-type annotation |
| Species | Human, mouse |
| GitHub stars | 112 |
| Interface | — |
Specs come from each project's README, paper or official page · scDeepSort README · scDeepSort site. “—” means we couldn't verify it.
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