MS2PIP
Predicts peptide fragmentation spectra (and with DeepLC/IM2Deep) for spectral libraries and rescoring.
| Category | Proteomics & metabolomics |
|---|---|
| GitHub | CompOmics/ms2pip |
| First public | 2019-01-20 (source) |
| Paper | https://doi.org/10.1093/nar/gkad335 |
| License | Apache-2.0 |
| Pricing | Open source |
| Tags | #mass-spec#spectrum-prediction#rescoring |
| Last checked | 2026-10-16 |
Specs
| Acquisition (DDA / DIA) | — |
|---|---|
| Task | MS2 fragmentation spectrum prediction |
| Input | Peptide sequence (tryptic, non-tryptic, immunopeptides) |
| GitHub stars | 50 |
| Interface | Web |
Specs come from each project's README, paper or official page · MS2PIP README · MS2PIP paper. “—” means we couldn't verify it.
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