BPNet
Base-resolution neural network for TF binding profiles (ChIP-nexus/ChIP-seq) and motif syntax discovery.
| Category | Genomics & DNA models |
|---|---|
| GitHub | kundajelab/bpnet |
| First public | 2019-08-21 (source) |
| Paper | https://doi.org/10.1038/s41588-021-00782-6 |
| License | MIT |
| Pricing | Open source |
| Tags | #epigenomics#tf-binding#interpretability |
| Last checked | 2026-10-16 |
Specs
| Input length / context | — |
|---|---|
| Resolution | Base resolution |
| Species | — |
| Tasks | Base-resolution ChIP-nexus TF binding profiles |
| GitHub stars | 187 |
| Interface | Package, Docker |
Specs come from each project's README, paper or official page · BPNet README · BPNet paper. “—” means we couldn't verify it.
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