VAMB
Variational autoencoder for metagenomic binning.
| Category | Microbiome & metagenomics |
|---|---|
| GitHub | RasmussenLab/vamb |
| First public | 2018-12-10 (source) |
| Paper | https://doi.org/10.1038/s41587-020-00777-4 |
| License | MIT |
| Pricing | Open source |
| Tags | #binning#vae#mags |
| Last checked | 2026-10-16 |
Specs
| Input | Contigs (k-mer + abundance) |
|---|---|
| Task | Metagenomic binning (VAE) |
| Reference database | — |
| GitHub stars | 334 |
| Interface | — |
Specs come from each project's README, paper or official page · VAMB README · VAMB paper. “—” means we couldn't verify it.
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