Foldseek
Fast and accurate protein structure search.
| Category | Protein structure & design |
|---|---|
| GitHub | steineggerlab/foldseek |
| First public | 2022-02-09 (source) |
| Paper | https://www.nature.com/articles/s41587-023-01773-0 |
| License | GPL-3.0 |
| Pricing | Open source |
| Tags | #search#structure |
| Last checked | 2026-10-16 |
Specs
| Task | Structure search, clustering |
|---|---|
| Modalities | Monomer, multimer |
| MSA required | — |
| Open weights | — |
| GPU need | — |
| GitHub stars | 1,313 |
| Interface | Package, Web |
Specs come from each project's README, paper or official page · Foldseek README. “—” means we couldn't verify it.
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