Cellpose
Generalist deep learning model for cellular segmentation.
| Category | Imaging & pathology |
|---|---|
| GitHub | MouseLand/cellpose |
| First public | 2020-02-03 (source) |
| Paper | https://www.nature.com/articles/s41592-020-01018-x |
| License | BSD-3-Clause |
| Pricing | Open source |
| Tags | #segmentation |
| Last checked | 2026-10-16 |
Compare with… Cellpose vs StarDist
Specs
| 2D / 3D | 2D, 3D |
|---|---|
| Modality | Microscopy |
| Segmentation type | Cell / nucleus instance |
| GitHub stars | 2,402 |
| Interface | Package, Colab |
Specs come from each project's README, paper or official page · Cellpose README. “—” means we couldn't verify it.
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